BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028G07LP1|AL428960
(923 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1753 1653 0.0
>3x_Contig1753
Length = 23959
Score = 1653 bits (829), Expect = 0.0
Identities = 901/923 (97%), Gaps = 8/923 (0%)
Strand = Plus / Minus
Query: 1 gatcttttgctttctagcagtctgtatgaatagagatcaaatcaaaaagaacattcgaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3332 gatcttttgctttctagcagtctgtatgaatagagatcaaatcaaaaagaacattcgaac 3273
Query: 61 gttcaatttgatgaatggctttaacgttagttaatcaaagtccatagggagggcattgct 120
||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 3272 gttcaatttgatgaatggctttaacgttagtaaatcaaagtcca-agggagggcattgct 3214
Query: 121 ttgtcaatcaagctatgtgaactgaatagcatacactctttgaagctagagasagatcgg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3213 ttgtcaatcaagctatgtgaactgaatagcatacactctttgaagctagagacagatcgg 3154
Query: 181 tcgactgatctgttgaagctgctatgaggtatgcggtccacacaatctcttgtwcaaaaa 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct: 3153 tcgactgatctgttgaagctgctatgaggtatgcagtccacacaatctcttgtacaaaaa 3094
Query: 241 aaataaaccagcctactgctattaacaatcgatgcaattgctgaatagaagatgaataat 300
|||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||
Sbjct: 3093 aaataaaccagcctactgctattaacaatc-at-caattgctgaata-aagatgaataat 3037
Query: 301 taaaaracacgcagatagccaccaagttgagttttccattgttagaaacttctgtcatcc 360
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3036 taaaaaacaga---atagccaccaagttgagttttccattgttagaaacttctgtcatcc 2980
Query: 361 aaatcttgtttgagacgatacagaggragtcgttggtttacagtycttcatcctttacga 420
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 2979 aaatcttgtttgagacgatacagaggaagtcgttggtttacagtccttcatcctttacga 2920
Query: 421 aatatattcaaattctctgatgttataattctagcaaatagtaaccaattcacttctaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2919 aatatattcaaattctctgatgttataattctagcaaatagtaaccaattcacttctaaa 2860
Query: 481 aacaagcgattttacaacattcttgtwcatacatttggagccattgttgtgattggttgt 540
||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 2859 gacaagcgattttacaacattcttgtacatacatttggagccattgttgtaattggttgt 2800
Query: 541 ttgtggtttctttagccttgactaaactatactgctataatgttgatgttaaatgtaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2799 ttgtggtttctttagccttgactaaactatactgctataatgttgatgttaaatgtaact 2740
Query: 601 atwatcttccaagttaaaggtttattgtgccgaaaagkttcatgcatctgcgagatcatc 660
|| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 2739 ataatcttccaagttaaaggtttattgtgccgaaaagtttcatgcatct-cgagatcatc 2681
Query: 661 gaagtggtttcgccaaagaaaaacaaccttcgaaatagctgaaataggaagtcattcatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2680 gaagtggtttcgccaaagaaaaacaaccttcgaaatagctgaaataggaagtcattcatt 2621
Query: 721 gacagttcttttttgaaaatatgtctgggttcagaaggacaatattcttataaacatcag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2620 gacagttcttttttgaaaatatgtctgggttcagaaggacaatattcttataaacatcag 2561
Query: 781 gacaccattgaacagtcctgacatcaagattaaagggcttcagaacatgaaaacagcatc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2560 gacaccattgaacagtcctgacatcaagattaaagggcttcagaacatgaaaacagcatc 2501
Query: 841 gattcaattagcactaaaagtgttgtgtttacacaatcggactgtagggtgcggaaagaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2500 gattcaattagcactaaaagtgttgtgtttacacaatcggactgtagggtgcggaaagaa 2441
Query: 901 ttggactattaacagaattcaaa 923
|||||||||||||||||||||||
Sbjct: 2440 ttggactattaacagaattcaaa 2418
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7651
Number of Sequences: 1807
Number of extensions: 7651
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 923
length of database: 10,358,551
effective HSP length: 16
effective length of query: 907
effective length of database: 10,329,639
effective search space: 9368982573
effective search space used: 9368982573
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)